Education
2020-[2025]
PhD - Department of Informatics, Palacky University, Olomouc
Expected graduation: 05/2025
2018-2020
MSc - Department of Biochemistry, Palacky University, Olomouc
Masters degree, Bioinformatics
2015-2018
Bc - Department of Biochemistry, Palacky University, Olomouc
Bachelor degree, Bioinformatics
Employment
2020-[now]
Researcher - Centre of Plant Structural and Functional Genomics, Institute of Experimental Botany AS CR, v.v.i
Conducting bioinformatic and statistical data analysis.
2019-[now]
Full-stack developer and network manager for ISP Unartel, s.r.o.
Working on a Freenetis application for managing network services.
2017-[now]
Research assistant - software developer
(2025-?) Pokusnice v2
(2019-2020) Developing Pokusnice hub - cookbook for high school chemistry teachers.
(2017-?) Developing MolMeDB - database of interactions of small molecules on biological membranes.
Research interests
Boolean/fuzzy matrix decomposition
Bioinformatics and biostatistics - Genome-wide association studies, Single Nucleotide Polymorphisms discovery, Transcriptome data analysis, BLAST, Phylogenetics, ...
Web technologies - PHP, Javascript, React (NextJS), CSS (Tailwind)
Databases
Docker and Kubernetes - container orchestration
Ansible - server and configuration management
Publications
MolMeDB: Molecules on Membranes Database
Juračka J., Šrejber M., Melíková M., Bazgier V., Berka K.: MolMeDB: Molecules on Membranes Database. Database, Volume 2019, 2019, baz078
For the complete list, please use the following links
ResearchGate, ORCID
0000-0003-2518-075X [Jakub Juračka] Courses
ANSIBLE - bulk automation and server management
May 2024 - Academy CZ.NIC
Kubernetes - container orcherstration
March 2024 - Academy CZ.NIC
Docker containers
March 2024 - Academy CZ.NIC
GIT - universal versioning system
March 2020 - Academy CZ.NIC
Projects
Freenetis frontend (2024 - now)
A complete poject design and development of a new GUI for Freenetis application utilizing React on the NextJS framework.
Technologies: React, NextJS, NextUI, Tailwind
Freenetis mobile (2020)
Smartphone alternative of Freenetis application for Android/iOS.
Technologies: Flutter (Currently replaced by a PWA version of the Freenetis frontend application.)
Freenetis: complex system for managing network services provided by ISP (2019-now)
Open source information system for managing community-based networks. It provides features like payment management, user and device management, services management, etc.
Pokusnice: Chemická kuchařka pro všechny (in czech) (2019-2020, 2025-now)
Chemická kuchařka vytvořená jako podpůrný materiál pro učitele středních a základních škol.
Technologies: PHP8, MySQL, Javascript, Python, HTML5, CSS3